Quick navigation: Home   |    Site Map   ||    References   |    Biography   ||    Copyright   |    Other copyright   |    Contact us   |    Advert   |   
 

Re: [ccp4bb] Simultaneous PHENIX and CCP4 burp

- Protein crystallography

Main steps:

   - Protein purification
   - Crystallisation

Special:

   - Programs for crystallography
   - X-ray detectors

Basic tutorials:

   - Chemistry
   - Protein
   - Peptide
   - Amino Acids

Xtal community:

   - CCP4BB

CCP4bb navigation

CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999
Previous message:
Subject: Re: Simultaneous PHENIX and CCP4 burp
From: Kevin Cowtan cowtan {- at -} YSBL {- dot -} YORK {- dot -} AC {- dot -} UK
Date: 2007-05-23
Next message:
Subject: Re: His-His H-bond
From: Ian Ollmann iano {- at -} APPLE {- dot -} COM
Date: 2007-05-23


Subject: Re: Simultaneous PHENIX and CCP4 burp
From: Frank von Delft frank {- dot -} vondelft {- at -} SGC {- dot -} OX {- dot -} AC {- dot -} UK
Date: 2007-05-23

Okay thanks, didn't know that.

Mind you, that's how *I* solve the problem; suggestion though for next
release: it probably shouldn't be a problem to begin with, since phenix too
will be a major program package.

Cheers
phx


> -----Original Message-----
> From: CCP4 bulletin board [mailto:CCP4BB@JISCMAIL.AC.UK] On
> Behalf Of Kevin Cowtan
> Sent: 23 May 2007 15:56
> To: CCP4BB@JISCMAIL.AC.UK
> Subject: Re: [ccp4bb] Simultaneous PHENIX and CCP4 burp
>
> Setup your path to find the phenix version (i.e. phenix goes
> first in your path).
>
> Then in CCP4i, go to System Administration/configure
> interface and at the bottom of the External Programs folder
> add the CCP4 paths for the conflicting applications
> explicitly, i.e. add 'phaser' in the lefts hand box and
> '/usr/local/ccp4-6.0.2/bin/phaser' (or whatever) in the right
> hand box.
>
> Kevin
>
> Frank von Delft wrote:
> > Hi, surprisingly I've not seen this question on either BB
> -- or else
> > nobody have both packages installed simultaneously (surely not????)
> >
> >
> >
> >
> >
> > Both ccp4 and phenix have a version of Phaser (v1.3.3 and
> v2 respectively).
> > Each is (?) incompatible with the other's GUI, yet in a
> simultaneous
> > install, only one can be on the PATH.
> > a) Are the executables very different? (v1.3.3 and v2.0
> for ccp4 and
> > phaser respectively.) v2 has an older release date...
> > b) How can one fix the path to make both executables
> available to the
> > shell?
> > c) The same problem affects mmtbx and cctbx etc.
> >
> >
> > Shouldn't the ccp4 versions maybe get different names?
> >
> > phx.
> >
> >
>

CCP4bb navigation

CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999
Previous message:
Subject: Re: Simultaneous PHENIX and CCP4 burp
From: Kevin Cowtan cowtan {- at -} YSBL {- dot -} YORK {- dot -} AC {- dot -} UK
Date: 2007-05-23
Next message:
Subject: Re: His-His H-bond
From: Ian Ollmann iano {- at -} APPLE {- dot -} COM
Date: 2007-05-23



ProteinCrystallography.org: Copyright 2006-2010 by Quid United Ltd