Re: [ccp4bb] quaternary structure comparison

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CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

Previous message:
Subject: Re: quaternary structure comparison
From: Roberto Steiner roberto {- dot -} steiner {- at -} KCL {- dot -} AC {- dot -} UK
Date: 2009-06-15

Next message:
Subject: combining phase information from a Se-Met and Hg SAD data sets
From: Arnon Lavie lavie {- at -} UIC {- dot -} EDU
Date: 2009-06-15

Subject: Re: quaternary structure comparison
From: "Mark J {- dot -} van Raaij" mark {- dot -} vanraaij {- at -} USC {- dot -} ES
Date: 2009-06-15

The human intelligance system "Alexey Murzin" of the LMB in Cambridge
comes to mind - helpful and knowledgable about "all" known folds.
Mark

Quoting Roberto Steiner :

> Hi Eike,
>
> PISA (http://www.ebi.ac.uk/msd-srv/prot_int/pistart.html) or SCOPPI
> (http://www.scoppi.org ) might be useful.
> Interested in hearing about other alternatives.
>
> Best wishes
> Roberto
>
> On 15 Jun 2009, at 21:28, Eike - Christian Schulz wrote:
>
>> Dear All,
>>
>> I solved a structure that has a very common tertiary structure
>> motif but it appears as if the arrangement of the monomers is
>> somewhat â€˜non-standartâ€™.
>>
>> Of course I performed a DALI search, which resulted in a great
>> number of hits due to the similarity of the tertiary structure
>> (Zâ€™s: 250 >8; 100 > 10).
>>
>> In order to check whether this arrangement that I see is something
>> new I would like to perform a quaternary structure comparison. Is
>> there any such tool available? A Google search wasn't very
>> conclusive. Or is there a clever combination of available resources?
>>
>> Kind regards
>>
>> Eike
>
> ---
> Roberto Steiner
> Randall Division of Cell and Molecular Biophysics
> New Hunt's House
> King's College London
> Guy's Campus
> London, SE1 1UL
> Phone +44 (0)20-7848-8216
> Fax +44 (0)20-7848-6435
> e-mail roberto.steiner@kcl.ac.uk

CCP4bb navigation

CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

Previous message:
Subject: Re: quaternary structure comparison
From: Roberto Steiner roberto {- dot -} steiner {- at -} KCL {- dot -} AC {- dot -} UK
Date: 2009-06-15

Next message:
Subject: combining phase information from a Se-Met and Hg SAD data sets
From: Arnon Lavie lavie {- at -} UIC {- dot -} EDU
Date: 2009-06-15