Re: [ccp4bb] A babyish question on coot

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CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

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Subject: A babyish question on coot
From: Yanming Zhang yzhang {- at -} MAILER {- dot -} SB {- dot -} FSU {- dot -} EDU
Date: 2007-05-28

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From: Nian Huang huangnian {- at -} GMAIL {- dot -} COM
Date: 2007-05-28

Subject: Re: A babyish question on coot
From: Josiah Obiero jmo012 {- at -} MAIL {- dot -} USASK {- dot -} CA
Date: 2007-05-28

Try alternate rotamers first, and then choose the closest to the
'right' electron density, before you do 'real space refine'
Regards,
Josiah.

Hi,

I use coot almost around the clock. One thing troubles me is that:
when clicking on 'real space refine zone', coot seems only care about
the
'real space'(Electron density), sometimes it will bring the model to
the density no matter whether the density was already claimed by other
model atoms or not, resulting in clash and unreasonable geometry. How
can
I avoid this?

Sorry for an old crystallographer to ask so babyish question. But your
help can save me lots of time.
Thanks
Yanming

CCP4bb navigation

CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

Previous message:
Subject: A babyish question on coot
From: Yanming Zhang yzhang {- at -} MAILER {- dot -} SB {- dot -} FSU {- dot -} EDU
Date: 2007-05-28

Next message:
Subject: Re: A babyish question on coot
From: Nian Huang huangnian {- at -} GMAIL {- dot -} COM
Date: 2007-05-28