Re: [ccp4bb] Rosettadock/Robetta server Interface analysis

- Protein crystallography

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CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

Previous message:
Subject: Molecular Replacement of a protein complex
From: Daniel Bonsor Bonsor {- at -} BBRI {- dot -} ORG
Date: 2009-07-09

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Subject: Re: Rosettadock/Robetta server Interface analysis
From: Eugene Krissinel keb {- at -} EBI {- dot -} AC {- dot -} UK
Date: 2009-07-09

Subject: Re: Rosettadock/Robetta server Interface analysis
From: Anastassis Perrakis a {- dot -} perrakis {- at -} NKI {- dot -} NL
Date: 2009-07-09

On 9 Jul 2009, at 19:16, Josiah Obiero wrote:

> Hi all,
>
> I am trying to compare the binding affinities of two small proteins
> to a bigger receptor protein by interface analyis (computational
> interface alanine scanning by Rosettadock/Robetta server). I was
> wondering:
>
> 1. If it possible to use DDGs of the individual amino acid residues
> to predict binding affinities
>
> 2. If there is another method of predicting binding affinities in
> silico
>
FoldX does a good job for me.

Tassos

> Thanks,
>
> Regards,
>
> Josiah.
>

CCP4bb navigation

CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

Previous message:
Subject: Molecular Replacement of a protein complex
From: Daniel Bonsor Bonsor {- at -} BBRI {- dot -} ORG
Date: 2009-07-09

Next message:
Subject: Re: Rosettadock/Robetta server Interface analysis
From: Eugene Krissinel keb {- at -} EBI {- dot -} AC {- dot -} UK
Date: 2009-07-09