[ccp4bb] Error/Bug in Pirate?

Protein crystallography Programs for crystallography X-ray detectors
Basic tutorials:
Protein Peptide

CCP4bb navigation

CCP4bb <-- 2007 <-- June 2007 <-- 04 June 2007

Previous message:
Subject: Re: B-factor & Space gr questions!
From: Edward A Berry eaberry {- at -} LBL {- dot -} GOV
Date: 2007-06-04

Next message:
Subject: Re: B-factor & Space gr questions!
From: David Briggs bassophile {- at -} GMAIL {- dot -} COM
Date: 2007-06-05

Subject: Error/Bug in Pirate?
From: Jeff Lee jlee {- at -} SCRIPPS {- dot -} EDU
Date: 2007-06-04

Hi All,

I've having some problems running the program Pirate and was
wondering if any wonderful ccp4er could help.

I'm trying to run Pirate v 0.4.9 using the ccp4 6.0.2 GUI. However,
whenever I run Pirate with NCS symmetry, I get an error message stating:

The program run with command: cpirate -stdin
has failed with error message
child killed: segmentation violation

Unfortunately, the error message is quite vague. It looks from the
log file that the mtz didn't even load. But if I run the exact same
job but without NCS symmetry the job runs fine. So it seems that my
mtz file is fine. I checked the heavy atom pdb used to determine the
NCS symmetry and the pdb looks okay in terms of formats. I'm puzzled
as to why I'm having trouble with the NCS feature in Pirate. Has
anyone also seen this problem with Pirate?

Thanks

Jeff

CCP4bb navigation

CCP4bb <-- 2007 <-- June 2007 <-- 04 June 2007

Previous message:
Subject: Re: B-factor & Space gr questions!
From: Edward A Berry eaberry {- at -} LBL {- dot -} GOV
Date: 2007-06-04

Next message:
Subject: Re: B-factor & Space gr questions!
From: David Briggs bassophile {- at -} GMAIL {- dot -} COM
Date: 2007-06-05