[ccp4bb] Gridzilla - A graphical tool to calculate crystal optimization screening grids

- Protein crystallography

Main steps:

- Protein purification
- Crystallisation

Special:

- Programs for crystallography
- X-ray detectors

Basic tutorials:

   - Chemistry
   - Protein
   - Peptide
   - Amino Acids

Xtal community:

- CCP4BB

CCP4bb navigation

CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

Previous message:
Subject: Re: Rfree in similar data set
From: Ian Tickle I {- dot -} Tickle {- at -} ASTEX-THERAPEUTICS {- dot -} COM
Date: 2009-09-24

Next message:
Subject: Re: Rfree in similar data set
From: Dirk Kostrewa kostrewa {- at -} GENZENTRUM {- dot -} LMU {- dot -} DE
Date: 2009-09-24

Subject: Gridzilla - A graphical tool to calculate crystal optimization screening grids
From: hari jayaram harijay {- at -} GMAIL {- dot -} COM
Date: 2009-09-24

Hello ,

I have written an application that makes it easy to design and calculate
protein crystallization optimization screens for 24 , 96 and 384 well plates
.

Starting with your stock solutions you can create any screening grid using
many gridding operations for eg. gradient along X , gradient along Y ,
constant value , gradient as list , buffer pH gradient etc

The application outputs the summary of the screen created as a PDF file
with reagents volumes and concentrations.
Although I wrote the application to create dispense lists for a formulatrix
liquid handling robot which we have in the lab, I am hoping it will be
useful to others to quickly design screens and calculate pipetting volumes
for manual screen preparation.

You can download a binary for Linux , Mac and Windows from

http://www.code-itch.com/gridzilla

There is also a screencast video that hopefully tells you how the app works
at :

http://code-itch.com/gridzilla/GridZillaScreencast.swf

The source code is available on the site and also on my github acount (
http://github.com/harijay). It can be easily adapted to support other liquid
handling input formats.

Please let me know if you find the app useful .
Feedback , suggestions etc are welcome.

Thanks

Hari Jayaram

CCP4bb navigation

CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

Previous message:
Subject: Re: Rfree in similar data set
From: Ian Tickle I {- dot -} Tickle {- at -} ASTEX-THERAPEUTICS {- dot -} COM
Date: 2009-09-24

Next message:
Subject: Re: Rfree in similar data set
From: Dirk Kostrewa kostrewa {- at -} GENZENTRUM {- dot -} LMU {- dot -} DE
Date: 2009-09-24