[ccp4bb] major modeling softwares

- Protein crystallography

Main steps:

- Protein purification
- Crystallisation

Special:

- Programs for crystallography
- X-ray detectors

Basic tutorials:

   - Chemistry
   - Protein
   - Peptide
   - Amino Acids

Xtal community:

- CCP4BB

CCP4bb navigation

CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

Previous message:
Subject: Re: problems with phaser for MR
From: "Randy J {- dot -} Read" rjr27 {- at -} CAM {- dot -} AC {- dot -} UK
Date: 2007-06-11

Next message:
Subject: Problem in refinement with ligand
From: Sampath Natarajan nsampath76 {- at -} YAHOO {- dot -} COM
Date: 2007-06-11

Subject: major modeling softwares
From: "Y {- dot -} -F {- dot -} Li" yongfuli {- at -} GMAIL {- dot -} COM
Date: 2007-06-11

Hello, ccp4,

I'd appreciate any comments on modeling softwares you would recommend
particularly in these aspects:
1) the capability of modeling any given aa sequence;
2) user-friendliness;
3) cost, etc

There are packages such as Modeler, Quanta, Insight II, but these are quite
expensive. I have used Coot for homology modeling however Coot requires a
map (to my knowledge, so I had to use a map to 'fool' it), and I secretly
hope the modeling feature can be included in the future versions. I have
also used O for modeling but it's less efficient. I guess when you have
crystal structures it's inevitable to explore the modeling realm.

Thanks in advance,

Yong

CCP4bb navigation

CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

Previous message:
Subject: Re: problems with phaser for MR
From: "Randy J {- dot -} Read" rjr27 {- at -} CAM {- dot -} AC {- dot -} UK
Date: 2007-06-11

Next message:
Subject: Problem in refinement with ligand
From: Sampath Natarajan nsampath76 {- at -} YAHOO {- dot -} COM
Date: 2007-06-11