Re: [ccp4bb] Unit of electrostatic potential in PyMol

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From: lei feng spartanfenglei {- at -} HOTMAIL {- dot -} COM
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Subject: Re: experience with the new coot 0.5.2 and a couple of questions
From: Paul Emsley paul {- dot -} emsley {- at -} BIOCH {- dot -} OX {- dot -} AC {- dot -} UK
Date: 2009-11-03

Subject: Re: Unit of electrostatic potential in PyMol
From: Warren DeLano warren {- at -} DELSCI {- dot -} COM
Date: 2009-11-02

Partha,

Sorry, but PyMOL's built-in potential calculation is qualitative -- if
you care about the actual units, then you should be using APBS instead.

Cheers,
Warren

________________________________

From: CCP4 bulletin board [mailto:CCP4BB@JISCMAIL.AC.UK] On
Behalf Of Parthasarathy Sampathkumar
Sent: Monday, November 02, 2009 3:43 PM
To: CCP4BB@JISCMAIL.AC.UK
Subject: [ccp4bb] Unit of electrostatic potential in PyMol

Dear All,

I used PyMol to generate a qualitative Vacum Electrostatic
surface (without APBS calculations).
Positve and negative potentials are displayed in the range 56.3
to -56.3.
What is the units of these numbers?

Thank you,
-Partha

CCP4bb navigation

CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

Previous message:
Subject: experience with the new coot 0.5.2 and a couple of questions
From: lei feng spartanfenglei {- at -} HOTMAIL {- dot -} COM
Date: 2009-11-02