Quick navigation: Home   |    Site Map   ||    References   |    Biography   ||    Copyright   |    Other copyright   |    Contact us   |    Advert   |   
 

[ccp4bb] How to reduce free-R factor

- Protein crystallography

Main steps:

   - Protein purification
   - Crystallisation

Special:

   - Programs for crystallography
   - X-ray detectors

Basic tutorials:

   - Chemistry
   - Protein
   - Peptide
   - Amino Acids

Xtal community:

   - CCP4BB

CCP4bb navigation

CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999
Previous message:
Subject: Re: How to add a single water molecule
From: Paul Emsley paul {- dot -} emsley {- at -} BIOCH {- dot -} OX {- dot -} AC {- dot -} UK
Date: 2009-12-03
Next message:
Subject: Re: How to reduce free-R factor
From: Pavel Afonine PAfonine {- at -} LBL {- dot -} GOV
Date: 2009-12-04


Subject: How to reduce free-R factor
From: Pankaj Chauhan pankajimtech {- at -} GMAIL {- dot -} COM
Date: 2009-12-03

Hi all,

In one of my 2.52 A structure, which is dimeric, the R-factor is 21.4 and
free-R is 29.3. I have tried all ways to reduce the free-R including TLS
(even by defining the number of TLS group per chain), but still factors are
not getting reduced. Even i have tried some other space group, but no use.
Even i have the same structure with some complex at 1.86 A in the same space
group , but everything is fine in that.
Any suggestion,
Regards,


--
Pankaj Chauhan
Senior Research Fellow, Graduate student
Crystallography Laboratory
Division of Protein Science & Engg.
IMTECH , Chandigarh, INDIA

CCP4bb navigation

CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999
Previous message:
Subject: Re: How to add a single water molecule
From: Paul Emsley paul {- dot -} emsley {- at -} BIOCH {- dot -} OX {- dot -} AC {- dot -} UK
Date: 2009-12-03
Next message:
Subject: Re: How to reduce free-R factor
From: Pavel Afonine PAfonine {- at -} LBL {- dot -} GOV
Date: 2009-12-04



ProteinCrystallography.org: Copyright 2006-2010 by Quid United Ltd