Re: [ccp4bb] arp/warp installation

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CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

Previous message:
Subject: Re: arp/warp installation
From: Phil Evans pre {- at -} MRC-LMB {- dot -} CAM {- dot -} AC {- dot -} UK
Date: 2010-01-04

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Subject: Re: arp/warp installation
From: Andreas_Förster docandreas {- at -} GMAIL {- dot -} COM
Date: 2010-01-04

As Phil realized, the leading zeros in the refmac5 version number were
the culprit that broke the original installation script. His modified
version works beautifully.

Thanks.

Andreas

On 04/01/2010 11:27, Phil Evans wrote:
> The attached slightly modified script fixes that problem
> Phil
>
>
>
>
>
>
> On 4 Jan 2010, at 11:15, Andreas Förster wrote:
>
>> Dear all,
>>
>> I downloaded ARP/wARP 7.1 from EMBL-Hamburg and executed ./install.sh. All tests pass up to and including refmac version check (see log below). After that, a "Badly formed number" in an if test. What could be the issue?
>>
>> The system is Redhat EL 5.4, tcsh.
>>
>> Thanks.
>>
>>
>> Andreas
>>
>>
>>
>> ld-andf 133% ./install.sh
>>
>> ARP/wARP installer is checking your c-shell...
>> c-shell is installed on your machine at /bin/csh
>> Your login shell is: /bin/tcsh
>>
>> Checking permissions for /dev/null - OK
>> Checking availability of sed command - OK
>> Checking availability of tail command - OK
>> Checking availability of awk command - OK
>> Checking decimal separator - OK
>> Checking ARP/wARP directory path - OK
>> Checking ARP/wARP directory structure - OK
>> Checking java installation - installed version is "1.6.0"
>> Checking java version number - OK
>> Checking python installation - installed version is 2.4.3
>> Checking python version number - OK
>> Python executables are available in /csb/soft/Linux/src/arp_warp_7.1/byte-code/python-2.4
>> Checking operating system name - Linux
>> Checking processor type - i686
>> ARP/wARP version 7.1 executables for this platform
>> are available in /csb/soft/Linux/src/arp_warp_7.1/bin/bin-i686-Linux
>>
>> Installing script and data files for:
>> bin-athlon-Linux
>> bin-i386-Darwin
>> bin-i686-Linux
>> bin-ia64-Linux
>> bin-powerpc-Darwin
>> bin-x86_64-Linux
>>
>> Checking CCP4& ARP/wARP installation - OK
>> Checking refmac5 installation - installed version is 5.5.0109
>> Checking refmac5 version number - OK
>> if: Badly formed number.
>>

--
Andreas Förster, Research Associate
Paul Freemont & Xiaodong Zhang Labs
Department of Biochemistry, Imperial College London
http://www.msf.bio.ic.ac.uk

CCP4bb navigation

CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

Previous message:
Subject: Re: arp/warp installation
From: Phil Evans pre {- at -} MRC-LMB {- dot -} CAM {- dot -} AC {- dot -} UK
Date: 2010-01-04

Next message:
Subject: Please apply for RapiData 2010, a course on Data Collection and Structure Solving at the NSLS.
From: Robert Sweet sweet {- at -} BNL {- dot -} GOV
Date: 2010-01-04