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Re: [ccp4bb] MTZ format conversion |
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CCP4bb navigationCCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999Subject: Re: MTZ format conversion From: "Ian J {- dot -} Tickle" i {- dot -} tickle {- at -} ASTEX-THERAPEUTICS {- dot -} COM Date: 2007-03-05 <45EC26D3.1050401@ysbl.york.ac.uk> <45EC333D.2040606@shelx.uni-ac.gwdg.de> <45EC3573.4090103@ysbl.york.ac.uk> <45EC3FE8.30208@ysbl.york.ac.uk> From: "Ian Tickle" To: Cc: Return-Path: I.Tickle@astex-therapeutics.com X-OriginalArrivalTime: 05 Mar 2007 16:21:56.0880 (UTC) FILETIME=[64E8B100:01C75F42] > -----Original Message----- > From: CCP4 bulletin board [mailto:CCP4BB@JISCMAIL.AC.UK] On > Behalf Of Eleanor Dodson > Sent: 05 March 2007 16:06 > To: CCP4BB@JISCMAIL.AC.UK > Subject: Re: [ccp4bb] MTZ format conversion > > All formats I know except CNS have single records per reflection. > > In CNS a reflection record can go over several lines - I > know no way of > avoiding requiring a format tt to read such a record.. > > A clever programmer could parse a few lines and work one out, but in > fact the format is not nec. consistent through the whole CNS file.. > > The only safe way I think is to parse every line and recognise the > different flags, then read the following number. One simple way is to just remove all the non-numeric tags (e.g. with jiffy Perl script like the one in f2mtz.doc), then read in everything in free format - without the tags to worry about it doesn't matter how many records each refln goes over. Of course the user would probably still have to work out how many columns per refln there are and what they are - I agree it would be tricky to do this automatically, you would be relying on the user to know what the columns are. Also you might need to delete unwanted columns _after_ conversion to MTZ. -- Ian Disclaimer This communication is confidential and may contain privileged information intended solely for the named addressee(s). It may not be used or disclosed except for the purpose for which it has been sent. If you are not the intended recipient you must not review, use, disclose, copy, distribute or take any action in reliance upon it. If you have received this communication in error, please notify Astex Therapeutics Ltd by emailing I.Tickle@astex-therapeutics.com and destroy all copies of the message and any attached documents. Astex Therapeutics Ltd monitors, controls and protects all its messaging traffic in compliance with its corporate email policy. The Company accepts no liability or responsibility for any onward transmission or use of emails and attachments having left the Astex Therapeutics domain. Unless expressly stated, opinions in this message are those of the individual sender and not of Astex Therapeutics Ltd. The recipient should check this email and any attachments for the presence of computer viruses. Astex Therapeutics Ltd accepts no liability for damage caused by any virus transmitted by this email. E-mail is susceptible to data corruption, interception, unauthorized amendment, and tampering, Astex Therapeutics Ltd only send and receive e-mails on the basis that the Company is not liable for any such alteration or any consequences thereof. CCP4bb navigationCCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999 |
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