Re: [ccp4bb] Coot- Find water

- Protein crystallography

Main steps:

- Protein purification
- Crystallisation

Special:

- Programs for crystallography
- X-ray detectors

Basic tutorials:

   - Chemistry
   - Protein
   - Peptide
   - Amino Acids

Xtal community:

- CCP4BB

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Subject: Re: Coot- Find water
From: Yong Y Wang WANG_YONG_Y {- at -} LILLY {- dot -} COM
Date: 2010-02-09

Paul,

It seems the distance criteria apply to protein atoms only, not including
bound water. Is there a way to include atoms from water molecules in the
distance constraint?

Yong

Paul Emsley
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Re: [ccp4bb] Coot- Find water

james09 pruza wrote:
>
>
> The find water option in coot is not picking up more that 10 water
> molecules but density is there. How can it be sorted out??

By changing the "Find peaks above", "Minimum distance" and "Maximum
distance" values in the dialog?

Paul.

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CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

Previous message:
Subject: Re: HIV-Protease movies
From: Stephen Weeks sd {- dot -} weeksy {- at -} GMAIL {- dot -} COM
Date: 2010-02-09

Next message:
Subject: Postdoctoral position avaliable
From: Marzena Pazgier mpazgier {- at -} IHV {- dot -} UMARYLAND {- dot -} EDU
Date: 2010-02-09