[ccp4bb] solvent excluded area and binding affinity

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CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

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Subject: Re: Phenix version 1.6.1 released
From: "Steiner, Roberto" roberto {- dot -} steiner {- at -} KCL {- dot -} AC {- dot -} UK
Date: 2010-04-01

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Subject: Re: secondary structure restraints [was: Phenix version 1.6.1 released]
From: Dirk Kostrewa kostrewa {- at -} GENZENTRUM {- dot -} LMU {- dot -} DE
Date: 2010-04-01

Subject: solvent excluded area and binding affinity
From: Mike England england {- dot -} hkl {- at -} GMAIL {- dot -} COM
Date: 2010-04-01

Hi All,

I would greatly appreciate your comments on following:

I would like to know the quantitative relation between "Solvent
excluded area" (calculated by Areaimol at CCP4i) and "free energy of
binding" or "binding affinity" of the DNA-protein or protein-protein
interactions.
Is there some free software available to do so?

Thank you very much.

Mike

CCP4bb navigation

CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

Previous message:
Subject: Re: Phenix version 1.6.1 released
From: "Steiner, Roberto" roberto {- dot -} steiner {- at -} KCL {- dot -} AC {- dot -} UK
Date: 2010-04-01

Next message:
Subject: Re: secondary structure restraints [was: Phenix version 1.6.1 released]
From: Dirk Kostrewa kostrewa {- at -} GENZENTRUM {- dot -} LMU {- dot -} DE
Date: 2010-04-01