[ccp4bb] how to refine RNA with two phosphate at 5' by phenix

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CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

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Subject: CAQ
From: Vin Purp buckybadger97 {- at -} NETSCAPE {- dot -} NET
Date: 2010-04-02

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Subject: Re: how to refine RNA with two phosphate at 5' by phenix
From: "William G {- dot -} Scott" wgscott {- at -} CHEMISTRY {- dot -} UCSC {- dot -} EDU
Date: 2010-04-03

Subject: how to refine RNA with two phosphate at 5' by phenix
From: Lisa Wang sciencecry {- at -} GMAIL {- dot -} COM
Date: 2010-04-02

hi all,
I have one structure contains dsRNA with two phosphate group at 5'.. I named
the first residue GDP and got a cif file by running phenix.elbow. Then I
refine my structure by running phenix.refine my.pdb my.cif. But the fist and
the second residue do not link with each other, that is no bond between O3*
of the fist residue and P of the second residue.
Please give me some idea. Thanks

CCP4bb navigation

CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

Previous message:
Subject: CAQ
From: Vin Purp buckybadger97 {- at -} NETSCAPE {- dot -} NET
Date: 2010-04-02

Next message:
Subject: Re: how to refine RNA with two phosphate at 5' by phenix
From: "William G {- dot -} Scott" wgscott {- at -} CHEMISTRY {- dot -} UCSC {- dot -} EDU
Date: 2010-04-03