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Re: [ccp4bb] Converting cif-files into pdb-files / reading cif -files into coot

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CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999
Previous message:
Subject: Re: Ligand present in only one monomer in NCS
From: Eleanor Dodson ccp4 {- at -} YSBL {- dot -} YORK {- dot -} AC {- dot -} UK
Date: 2010-06-01
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Subject: Re: Converting cif-files into pdb-files / reading cif -files into coot
From: Vellieux Frederic Frederic {- dot -} Vellieux {- at -} IBS {- dot -} FR
Date: 2010-06-01


Subject: Re: Converting cif-files into pdb-files / reading cif -files into coot
From: Ed Pozharski epozh001 {- at -} UMARYLAND {- dot -} EDU
Date: 2010-06-01

http://sw-tools.pdb.org/apps/CIFTr/


On Tue, 2010-06-01 at 15:21 +0200, Christian Engel wrote:
> Dear All,
>
> I am looking for a ccp4 program that reads in cif-files and converts
> them into pdb-files, including the CRYST1 card. Can anybody suggest a
> solution? I didn't find any in ccp4i, e.g. the coordinate utilities.
>
> I also tried COOT to read in cif-files (downloaded from the pdb
> server). For one example it crashed, for others it doesn't colour the
> bonds properly if "Bonds (Colour by Atom)" is chosen but shows
> all bonds in one colour. Is that a known feature? If I save these
> coordinates in pdb-format and try to read it back, I get an ERROR
> saying: "Wrong ASCII format of an integer".
>
>
> Thanks for any suggestions
> Christian Engel
>
>
>
> Mit freundlichen Grüßen / Best regards / Cordialement
>
> Dr. Christian Engel
>
> Sanofi-Aventis Deutschland GmbH
> R&D CAS Structural Biology FFM
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> D-65926 Frankfurt am Main
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>
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>
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--
Edwin Pozharski, PhD, Assistant Professor
University of Maryland, Baltimore
----------------------------------------------
When the Way is forgotten duty and justice appear;
Then knowledge and wisdom are born along with hypocrisy.
When harmonious relationships dissolve then respect and devotion arise;
When a nation falls to chaos then loyalty and patriotism are born.
------------------------------ / Lao Tse /

CCP4bb navigation

CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999
Previous message:
Subject: Re: Ligand present in only one monomer in NCS
From: Eleanor Dodson ccp4 {- at -} YSBL {- dot -} YORK {- dot -} AC {- dot -} UK
Date: 2010-06-01
Next message:
Subject: Re: Converting cif-files into pdb-files / reading cif -files into coot
From: Vellieux Frederic Frederic {- dot -} Vellieux {- at -} IBS {- dot -} FR
Date: 2010-06-01



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