[ccp4bb] Where to find "novelty" of PDBids?

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CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

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Subject: Where to find "novelty" of PDBids?
From: Christine Zardecki zardecki {- at -} RCSB {- dot -} RUTGERS {- dot -} EDU
Date: 2010-06-11

TargetDB performs this type of analysis for structures deposited by
structural genomics projects.
Tabulations of novel depositions can be found at
http://targetdb.pdb.org/Metrics/MilestonesTables.html.

The data from which these statistics were calculated from sequence
clustering performed by the RCSB PDB. Sequence clustering is updated
weekly at ftp://resources.rcsb.org/sequence/clusters/.

Archived, time-stamped files containing sequence clustering data from
the weekly update from 2007 - 2009 are available from
ftp://snapshots.rcsb.org/20090105/pub/pdb/derived_data/NR/blastclust/
archive/.

Best,

Christine
RCSB Protein Data Bank

-------- Original Message --------
Subject:
[ccp4bb] Where to find "novelty" of PDBids?
Date:
Wed, 9 Jun 2010 09:52:46 +0100
From:
Frank von Delft
Reply-To:
Frank von Delft
To:
CCP4BB@JISCMAIL.AC.UK

Hi, for an analysis I need the sequence identity of any PDBid to its
closest match in the PDB *at the time it was deposited*.

It seems like something somebody would have done before; any thoughts
where to find it?

Cheers
phx

CCP4bb navigation

CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

Previous message:
Subject: Petsko-Ringe Symposium on June 18-19, 2010
From: Raji Edayathumangalam raji {- at -} BRANDEIS {- dot -} EDU
Date: 2010-06-11

Next message:
Subject: pointless failed
From: Raja Dey deyraja1 {- at -} YAHOO {- dot -} CO {- dot -} IN
Date: 2010-06-12