[ccp4bb] standard accessible area of residues

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CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

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Subject: Re: extend resolution in refmac
From: Eleanor Dodson ccp4 {- at -} YSBL {- dot -} YORK {- dot -} AC {- dot -} UK
Date: 2007-07-16

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From: Tom Terwilliger terwilliger {- at -} LANL {- dot -} GOV
Date: 2007-07-16

Subject: standard accessible area of residues
From: Hyunchul Kim sundol {- at -} SFC {- dot -} KEIO {- dot -} AC {- dot -} JP
Date: 2007-07-16

Dear all,

Could you let me know where I can get or calculate the standard
accessible area of residues?

I want to determine if a residue is a solvent accessible one or buried
one by calculating the ratio of solvent accessible area to standard
accessible area.

I managed to calculate the solvent accessible area by AREAIMOL but that
doesn't contain information for ratio or standard accessible area.

Any comment are welcome.

Thank you in advance,

Best,
Hyunchul Kim

CCP4bb navigation

CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

Previous message:
Subject: Re: extend resolution in refmac
From: Eleanor Dodson ccp4 {- at -} YSBL {- dot -} YORK {- dot -} AC {- dot -} UK
Date: 2007-07-16

Next message:
Subject: Please send in comments on structural genomics to NIH by Friday July 20
From: Tom Terwilliger terwilliger {- at -} LANL {- dot -} GOV
Date: 2007-07-16