[ccp4bb] RMSD

- Protein crystallography

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- Crystallisation

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CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

Previous message:
Subject: Software Developer Position at Berkeley Center for Structural Biology
From: Paul Adams PDAdams {- at -} LBL {- dot -} GOV
Date: 2007-03-13

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Subject: Re: RMSD
From: Dirk Kostrewa dirk {- dot -} kostrewa {- at -} PSI {- dot -} CH
Date: 2007-03-14

Subject: RMSD
From: john kryst protkryst {- at -} GMAIL {- dot -} COM
Date: 2007-03-14

Hi ccp4bb !!!

Does the rmsd estimation (for eg. rmsd_bonds ) depends on the program we use
??

Example : shifting from Refmac to CNS. There appears to be an increase in
rmsd of bonds even without refining the structure in CNS. Is the estimation
methods are different or am i doing something wrong !!

Thanks for your valuable inputs.

regards
john

CCP4bb navigation

CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

Previous message:
Subject: Software Developer Position at Berkeley Center for Structural Biology
From: Paul Adams PDAdams {- at -} LBL {- dot -} GOV
Date: 2007-03-13

Next message:
Subject: Re: RMSD
From: Dirk Kostrewa dirk {- dot -} kostrewa {- at -} PSI {- dot -} CH
Date: 2007-03-14