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[ccp4bb] Morphing with mutations
 

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CCP4bb <-- 2007 <-- October 2007 <-- 02 October 2007
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Subject: Re: R-sleep
From: James Whisstock James {- dot -} Whisstock {- at -} MED {- dot -} MONASH {- dot -} EDU {- dot -} AU
Date: 2007-10-01 		Next message:
Subject: Course on Biomolecular Modelling
From: Patrick Sticher sticher {- at -} BIOC {- dot -} UNIZH {- dot -} CH
Date: 2007-10-02


Subject: Morphing with mutations
From: Claudia Scotti claudiascotti {- at -} HOTMAIL {- dot -} COM
Date: 2007-10-02
Dear List,

Sorry to disturb, but it's the first time I'd need to build a morphing movie.
Particularly, I'd like to morph a series of mutant proteins one into the other. I tried the Morph server and Moviemaker, but both of them cut the side chains of non-matching amino acids to ala. This means that I cannot see any mutations "taking place" in my movies, but only the side chain of the alanines.

Does anybody know, please, any alternative program or trick to transfom the side chain of a residues into its mutated counterpart, please, with a nice and smooth visual effect?
Does LSQMAN, for example, sort this problem out? It is not clear to me reading the manual.

Many many thanks,

Claudia


Claudia Scotti> Dipartimento di Medicina Sperimentale> Sezione di Patologia Generale> Universita' di Pavia> Piazza Botta, 10> 27100 Pavia> Italia> Tel. 0039 0382 986335/8/1> Facs 0039 0382 303673>> _________________________________________________________________> Connect to the next generation of MSN Messenger > http://imagine-msn.com/messenger/launch80/default.aspx?locale=en-us&source=wlmailtagline> -------------------------------------------------------------------------> This SF.net email is sponsored by: Microsoft> Defy all challenges. Microsoft(R) Visual Studio 2005.> http://clk.atdmt.com/MRT/go/vse0120000070mrt/direct/01/> _______________________________________________> PyMOL-users mailing list> PyMOL-users@lists.sourceforge.net> https://lists.sourceforge.net/lists/listinfo/pymol-users

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CCP4bb navigation

CCP4bb <-- 2007 <-- October 2007 <-- 02 October 2007
Previous message:
Subject: Re: R-sleep
From: James Whisstock James {- dot -} Whisstock {- at -} MED {- dot -} MONASH {- dot -} EDU {- dot -} AU
Date: 2007-10-01 		Next message:
Subject: Course on Biomolecular Modelling
From: Patrick Sticher sticher {- at -} BIOC {- dot -} UNIZH {- dot -} CH
Date: 2007-10-02


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