[ccp4bb] protein sequence database with conservation score annotation

- Protein crystallography

Main steps:

- Protein purification
- Crystallisation

Special:

- Programs for crystallography
- X-ray detectors

Basic tutorials:

   - Chemistry
   - Protein
   - Peptide
   - Amino Acids

Xtal community:

- CCP4BB

CCP4bb navigation

CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

Previous message:
Subject: Re: Purify non-stable protein
From: Ho Leung Ng hng {- at -} HAWAII {- dot -} EDU
Date: 2012-08-22

Next message:
Subject: Re: protein sequence database with conservation score annotation
From: Robbie Joosten robbie_joosten {- at -} HOTMAIL {- dot -} COM
Date: 2012-08-22

Subject: protein sequence database with conservation score annotation
From: å•†å…ƒ shangyuan5000 {- at -} GMAIL {- dot -} COM
Date: 2012-08-22

Hi,everyone,
Does anyone here could recommend such a database for me? I've searched
the web and only find tools like 'consurf'. Databases like 'consurf' are
important for the analysis of the current known structures. However, for
the original discoveries of new domains, sequence databases with such
conservation score annotation could be as important as the secondary
structure prediction.
Although the 'conservation score' maynot be as accurate as that from the
'consurf database' which is based on the 3-D alignment. The information of
such database could be much more helpful, especially for some new proteins,
or proteins regions without any structure available.

Best regards,
Yuan SHANG
HKUST

CCP4bb navigation

CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

Previous message:
Subject: Re: Purify non-stable protein
From: Ho Leung Ng hng {- at -} HAWAII {- dot -} EDU
Date: 2012-08-22

Next message:
Subject: Re: protein sequence database with conservation score annotation
From: Robbie Joosten robbie_joosten {- at -} HOTMAIL {- dot -} COM
Date: 2012-08-22