Re: [ccp4bb] Protein interface prediction tool?

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CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

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From: Marcelo Carlos Sousa Marcelo {- dot -} Sousa {- at -} COLORADO {- dot -} EDU
Date: 2007-11-29

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Subject: Re: Protein interface prediction tool?
From: Andrew Orry andy {- at -} MOLSOFT {- dot -} COM
Date: 2007-11-29

Karen,

MolSoft offers a free online tool that predicts protein-protein
interfaces using our ICM software.
http://www.molsoft.com/oda.cgi

more information here:
http://www.molsoft.com/oda.html
Fernandez-Recio, J., Totrov, M., Skorodumov, C., Abagyan, R.Optimal
Docking Area: A New Method for Predicting Protein-Protein Interaction
Sites. Proteins 57:400-13

Thanks,
Andy

karen yates wrote:
> Hi,
>
> I would like to find a bioinformatic tool that will allow me to predict the
> dimerisation interface of a protein.
>
> A structural model has been generated, and it is known to exist as a homo-dimer.
>
> Does anyone know of a suitable program?
>
> Thank you for your help.
>
> Karen
>
>
>
> ----------------------------------------------------------------
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--
Andrew Orry Ph.D.
Senior Scientist
MolSoft LLC
3366 North Torrey Pines Court
Suite 300
La Jolla, CA 92037
U S A

Phone: (858) 625-2000 (x108)
Fax: (858) 625-2888
www.molsoft.com

CCP4bb navigation

CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

Previous message:
Subject: HHMI X-ray lab manager/Research Scientist Job
From: Marcelo Carlos Sousa Marcelo {- dot -} Sousa {- at -} COLORADO {- dot -} EDU
Date: 2007-11-29

Next message:
Subject: Re: S-S in EC
From: Bernhard Rupp bernhardrupp {- at -} SBCGLOBAL {- dot -} NET
Date: 2007-11-29