[ccp4bb] I have my bound ligand (I think), now what?

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CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

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Subject: Re: how to change a membrane protein into a water soluble protein?
From: Brenda Patterson ucbccka {- at -} UCL {- dot -} AC {- dot -} UK
Date: 2007-12-04

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Subject: Re: how to change a membrane protein into a water soluble protein?
From: Scott Pegan pegan {- at -} UIC {- dot -} EDU
Date: 2007-12-04

Subject: I have my bound ligand (I think), now what?
From: Brenda Patterson ucbccka {- at -} UCL {- dot -} AC {- dot -} UK
Date: 2007-12-04

Hello all,

right, I think I have found a ligand bound to my protein.

I used the COOT utility to find the ligands after reading in a model
and library
file generated by sketcher of my ligand. Now I am a bit unsure as to how to
proceed? How can I 'accept' a state and/or refine it?

Maybe there is a better way to model my ligand into the electron density not
accounted for by my protein?

Any general suggestions or comments would be appreciated as I am very
inexperienced.

cheers

Brenda

CCP4bb navigation

CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

Previous message:
Subject: Re: how to change a membrane protein into a water soluble protein?
From: Brenda Patterson ucbccka {- at -} UCL {- dot -} AC {- dot -} UK
Date: 2007-12-04

Next message:
Subject: Re: how to change a membrane protein into a water soluble protein?
From: Scott Pegan pegan {- at -} UIC {- dot -} EDU
Date: 2007-12-04