Re: [ccp4bb] change the B-factor for a residue

- Protein crystallography

Main steps:

- Protein purification
- Crystallisation

Special:

- Programs for crystallography
- X-ray detectors

Basic tutorials:

   - Chemistry
   - Protein
   - Peptide
   - Amino Acids

Xtal community:

- CCP4BB

CCP4bb navigation

CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

Previous message:
Subject: change the B-factor for a residue
From: Lucas Bleicher lbleicher {- at -} YAHOO {- dot -} COM
Date: 2007-03-23

Next message:
Subject: Job opportunity at the Structural Genomics Consortium
From: Declan Doyle Declan {- dot -} Doyle {- at -} SGC {- dot -} OX {- dot -} AC {- dot -} UK
Date: 2007-03-23

Subject: Re: change the B-factor for a residue
From: Juergen Bosch jbosch {- at -} U {- dot -} WASHINGTON {- dot -} EDU
Date: 2007-03-23

Lucas Bleicher wrote:

>Is there a program in CCP4 with a command to change
>the B-factor of a single residue? I checked the
>documentation for pdbset and it seems to assign
>B-factors only for the whole molecule.
>
>What I'd like to do is plot a given residue property
>in a graphic software using the "color by b-factor"
>feature. I could write a script to directly parse and
>modify the PDB file, but things would be easier if I
>could just generate a script that used some program
>which would handle the B-factor assignment.
>
>Lucas
>
>__________________________________________________
>Fale com seus amigos de graça com o novo Yahoo! Messenger
>http://br.messenger.yahoo.com/
>
>
>
How about Coot ? Click the residue you want to change and hit Resdiue
Property.

Juergen

--
Jürgen Bosch
University of Washington
Dept. of Biochemistry, K-426
1705 NE Pacific Street
Seattle, WA 98195
Box 357742
Phone: +1-206-616-4510
FAX: +1-206-685-7002

CCP4bb navigation

CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

Previous message:
Subject: change the B-factor for a residue
From: Lucas Bleicher lbleicher {- at -} YAHOO {- dot -} COM
Date: 2007-03-23

Next message:
Subject: Job opportunity at the Structural Genomics Consortium
From: Declan Doyle Declan {- dot -} Doyle {- at -} SGC {- dot -} OX {- dot -} AC {- dot -} UK
Date: 2007-03-23