[ccp4bb] SC program in CCP4 - No radius found for residue G atom P

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From: wu donghui wdh0972 {- at -} GMAIL {- dot -} COM
Date: 2008-02-26

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From: Garib Murshudov garib {- at -} YSBL {- dot -} YORK {- dot -} AC {- dot -} UK
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Subject: SC program in CCP4 - No radius found for residue G atom P
From: Rosemary Harrison r {- dot -} harrison {- at -} IMB {- dot -} UQ {- dot -} EDU {- dot -} AU
Date: 2008-02-27

Hi,

I have been trying to run SC on a pdb file with an RNA fragment.
I get the answer below. There appears to be a problem with the P in
the RNA backbone.

Has anyone else had this problem and/or suggestions to fix it

Thanks in advance,
Rose Harrison

Parameter values
----------------
Dot density : 15.00 per square Angstrom
Interface separation : 8.00 Angstroms
Trim width : 1.50 Angstroms
Probe radius : 1.70 Angstroms
Weight factor : 0.50 per square Angstrom
No radius found for
Residue G Atom P

SC: S/r assign_r: no radius for residue/atom
SC: S/r assign_r: no radius for residue/atom

CCP4bb navigation
CCP4bb <-- 2008 <-- February 2008 <-- 27 February 2008

Previous message:
Subject: Re: Off topic: ask about cryoprotectant selection using lithium sulfate as precipitant for crystal growth
From: wu donghui wdh0972 {- at -} GMAIL {- dot -} COM
Date: 2008-02-26 Next message:
Subject: Re: modified amino acid connection to protein
From: Garib Murshudov garib {- at -} YSBL {- dot -} YORK {- dot -} AC {- dot -} UK
Date: 2008-02-27