Re: [ccp4bb] superimpose two maps

- Protein crystallography

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CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

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Subject: superimpose two maps
From: Yanming Zhang yzhang {- at -} MAILER {- dot -} SB {- dot -} FSU {- dot -} EDU
Date: 2008-03-03

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Subject: Re: superimpose two maps
From: Paul Emsley paul {- dot -} emsley {- at -} BIOCH {- dot -} OX {- dot -} AC {- dot -} UK
Date: 2008-03-04

Yanming Zhang wrote:
> Hello,
>
> I did the replacement soaking and it was successful. Now I want to
> superimpose the two maps to show (I hate to show off but I have to) the
> map diffrence of the ligand region to demonstrate that the replacement
> soaking was a success. Is there a way to superimpose the two maps?
>
> The two maps are from two different crystals with same space group but
> slightly different cell parameters.

If you want to use Coot, transform-map or transform-map-using-lsq-matrix
are the functions you'd want to use.

http://www.ysbl.york.ac.uk/~emsley/coot/doc/chapters/user-manual_6.html#SEC165

Paul.

CCP4bb navigation

CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

Previous message:
Subject: superimpose two maps
From: Yanming Zhang yzhang {- at -} MAILER {- dot -} SB {- dot -} FSU {- dot -} EDU
Date: 2008-03-03

Next message:
Subject: WM DELETE WINDOW
From: James Stroud jstroud {- at -} MBI {- dot -} UCLA {- dot -} EDU
Date: 2008-03-04