Quick navigation: Home   |    Site Map   ||    References   |    Biography   ||    Copyright   |    Other copyright   |    Contact us   |    Advert   |   
 

[ccp4bb] density modify.inp is not running in cns1.2 but runs in cns1.1

- Protein crystallography

Main steps:

   - Protein purification
   - Crystallisation

Special:

   - Programs for crystallography
   - X-ray detectors

Basic tutorials:

   - Chemistry
   - Protein
   - Peptide
   - Amino Acids

Xtal community:

   - CCP4BB

CCP4bb navigation

CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999
Previous message:
Subject: Re: Kay Diederichs and Novel R source?
From: Juergen Bosch jbosch {- at -} U {- dot -} WASHINGTON {- dot -} EDU
Date: 2008-04-21
Next message:
Subject: data recovery
From: Wojtek Rypniewski wojtekr {- at -} IBCH {- dot -} POZNAN {- dot -} PL
Date: 2008-04-22


Subject: density modify.inp is not running in cns1.2 but runs in cns1.1
From: Raja Dey deyraja1 {- at -} YAHOO {- dot -} CO {- dot -} IN
Date: 2008-04-21

Hi All, I am trying to run density_modify.inp in cns 1.2. it stops with the error enclosed below. But, it runs with cns 1.1 perfectly. I am using the same two data files(e.g. p65_se_rdey.hkl.cv and combine.hkl). Does anyone have experience like this? Any solution is well appreciated.
Regards...
Raja


ANOMalous=TRUE {ON}
Program version= 1.2 File version= 1.2
%XMAPASU-AUTOmem: increasing memory allocation to 2000000
Minimum brick that covers asymmetric unit:
A= 0,..., 64 B= 0,..., 64 C= 0,..., 25
Sum of 5287 elements = 5287.0000
SHOW: average of 102400 elements= 0.0000
ANOMalous=TRUE {ON}
XMPST: average = 0.0000 minimum = 0.0000 maximum = 0.0000
XMPST: r.m.s. = 0.0000 norm = 0.0000
XMHISTO: (default from map) RHOMIN and RHOMAX = 0.0000 0.0000
%XMHISTO-ERR: a complete flat map.
XMHISTO: (default from map) SLOT width = 0.000000
%XMHISTO-ERR: the SLOT width is too small 0.00000
XMHISTO: the number of slots MBINS=10000 and width SLOT= 0.0000
%XDOTYPE-ERR: Variable/type mismatch:
do (masksol=1) (real(automap) <= $cutoff)
^
%DO-ERR: Data type mismatch. Selection must be a logical expression.:
do (masksol=1) (real(automap) <= $cutoff)
^
%SHOW error encountered: There were errors in DO expression.
(CNS is in mode: SET ABORT=NORMal END)
*****************************************************
ABORT mode will terminate program execution.
*****************************************************
Program will stop immediately.
============================================================
Maximum dynamic memory allocation: 18336916 bytes
Maximum dynamic memory overhead: 360 bytes
Program started at : 18:01:44 on 21-Apr-2008
Program stopped at : 18:01:46 on 21-Apr-2008
CPU time used : 1.9700 seconds
Total runtime : 0.0000 seconds


Program compiled by David Gohara




Regards...
Raja







Download prohibited? No problem. CHAT from any browser, without download. Go to http://in.messenger.yahoo.com/webmessengerpromo.php/

CCP4bb navigation

CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999
Previous message:
Subject: Re: Kay Diederichs and Novel R source?
From: Juergen Bosch jbosch {- at -} U {- dot -} WASHINGTON {- dot -} EDU
Date: 2008-04-21
Next message:
Subject: data recovery
From: Wojtek Rypniewski wojtekr {- at -} IBCH {- dot -} POZNAN {- dot -} PL
Date: 2008-04-22



ProteinCrystallography.org: Copyright 2006-2010 by Quid United Ltd