Quick navigation:        Home   |    Site Map   ||    References   |    Biography   ||    Copyright   |    Other copyright   |    Contact us   |   
Protein structure
 

Re: [ccp4bb] How to create TLS file
 

Basic tutorials: 		 
 

CCP4bb navigation

CCP4bb <-- 2008 <-- May 2008 <-- 07 May 2008
Previous message:
Subject: Re: How to create TLS file
From: Georg Zocher georg {- dot -} zocher {- at -} BESSY {- dot -} DE
Date: 2008-05-07 		Next message:
Subject: Re: HKL2000 and gcc4 - redux
From: Chris Waddling waddling {- at -} MSG {- dot -} UCSF {- dot -} EDU
Date: 2008-05-07


Subject: Re: How to create TLS file
From: "David R {- dot -} Cooper" dcoop {- at -} VIRGINIA {- dot -} EDU
Date: 2008-05-07
The CCP4i method is to use the "Create / Edit TLS File" task in the
"Refinement" module.

I have used the TLSMD-server before, and I do like it.
I did notice that my R-free would be lower if I used the server's
definitions of TLS groups, but let Refmac do the TLS analysis from scratch
instead of using the server's TLS values. Has anyone else seeen this?

David

On Wed, 7 May 2008 19:29:53 +0200
Georg Zocher wrote:
> U Sam schrieb:
>> Suggestion please. How TLS file is created to be used in Refmac
>>refinement.
>> Thanks. Sam
>> _________________________________________________________________
>> Get Free (PRODUCT) RED™ Emoticons, Winks and Display Pics.
>> http://joinred.spaces.live.com?ocid=TXT_HMTG_prodredemoticons_052008
>
> I recommend to use the TLSMD-server (J Painter & E A Merritt (2006) Acta
>Cryst. D62, 439-450)
> http://skuld.bmsc.washington.edu/~tlsmd/
>
> best regards,
> georg
>
> --
> Dr. Georg Zocher
> BESSY-MX group BESSY GmbH
> Albert-Einstein-Straße-15
> D-12489 Berlin
>
> Fon : +49-(0)30-6392 4973
> Fax : +49-(0)30-6392 4975
> email: georg.zocher@bessy.de
> url : http://www.psf.bessy.de/
>
> BESSY GmbH - Mitglied der Leibniz Gemeinschaft
> Vorsitzender des Aufsichtsrates: Prof. Dr. Dr. h.c. mult Joachim Treusch
> Geschäftsführer: Prof. Dr. Dr. h.c. Wolfgang Eberhardt, Prof. Dr.Eberhard
>Jaeschke Sitz Berlin, AG Charlottenburg, HRB 14635

.
-------------------------------------------
David Cooper, Ph.D.
University of Virginia
Molecular Physiology and Biological Physics
Jordan Hall, Box 800736
1300 Jefferson Park Ave
Charlottesville, VA 22908-0736
Phone: (434) 982-3151
Fax: (434) 982-1616
ProteinCrystallography.org: Copyright 2006-2008 by Quid United Ltd