Re: [ccp4bb] Making a Poly ala model

- Protein crystallography

Main steps:

- Protein purification
- Crystallisation

Special:

- Programs for crystallography
- X-ray detectors

Basic tutorials:

   - Chemistry
   - Protein
   - Peptide
   - Amino Acids

Xtal community:

- CCP4BB

CCP4bb navigation

CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

Previous message:
Subject: Siemens Multiwire Area Detector X-1000 available
From: Aleksander Roszak aleks {- at -} CHEM {- dot -} GLA {- dot -} AC {- dot -} UK
Date: 2008-05-29

Next message:
Subject: Re: Making a Poly ala model
From: Warren DeLano warren {- at -} DELSCI {- dot -} COM
Date: 2008-05-29

Subject: Re: Making a Poly ala model
From: Nicolas Soler soler {- at -} ICSN {- dot -} CNRS-GIF {- dot -} FR
Date: 2008-05-29

#!/usr/bin/perl -w

############################################################################################
# Mutala: script mutate each residue in alanine in a pdb file #
# Written by Nicolas Soler #
########################FONCTIONS###########################################################
foreach $fichier (@ARGV) {
open (ENTREE,$fichier);

if (glob "polyala$fichier"){unlink "polyala$fichier"};
open SORTIE, ">>polyala$fichier";
select SORTIE;

while (){if (/^ATOM.{9}(N
C
O
CA
CB)..(w{3})/){s/$2/ALA/;print $_}};

print "END";
close ENTREE;
close SORTIE;}

CCP4bb navigation

CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

Previous message:
Subject: Siemens Multiwire Area Detector X-1000 available
From: Aleksander Roszak aleks {- at -} CHEM {- dot -} GLA {- dot -} AC {- dot -} UK
Date: 2008-05-29

Next message:
Subject: Re: Making a Poly ala model
From: Warren DeLano warren {- at -} DELSCI {- dot -} COM
Date: 2008-05-29