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Re: [ccp4bb] B factor calculation
 

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CCP4bb <-- 2008 <-- June 2008 <-- 04 June 2008
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Subject: B factor calculation
From: xu zhen xu7610 {- at -} HOTMAIL {- dot -} COM
Date: 2008-06-04 		Next message:
Subject: Re: B factor calculation
From: Roger Rowlett rrowlett {- at -} MAIL {- dot -} COLGATE {- dot -} EDU
Date: 2008-06-04


Subject: Re: B factor calculation
From: Pavel Afonine PAfonine {- at -} LBL {- dot -} GOV
Date: 2008-06-04
For example,

this will show you complete statistics about B-factors:

phenix.pbdtools your_model.pdb --show-adp-statistics

this will show you complete statistics about stereochemistry:

phenix.pbdtools your_model.pdb --show-geometry-statistics

For more information:
http://www.phenix-online.org/

or ask me directly.

Cheers,
Pavel.




On 6/4/2008 12:40 PM, xu zhen wrote:
> Hi, everyone,
>
> I am preparing the table of data collection and refinement statics. In this table, I need to list the average B factor of protein, ligand and water seperately, can you tell me how to calculate thoes numbers?
>
> Zhen
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CCP4bb navigation

CCP4bb <-- 2008 <-- June 2008 <-- 04 June 2008
Previous message:
Subject: B factor calculation
From: xu zhen xu7610 {- at -} HOTMAIL {- dot -} COM
Date: 2008-06-04 		Next message:
Subject: Re: B factor calculation
From: Roger Rowlett rrowlett {- at -} MAIL {- dot -} COLGATE {- dot -} EDU
Date: 2008-06-04


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