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Re: [ccp4bb] Refinement in half occupancy

 

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CCP4bb <-- 2008 <-- June 2008 <-- 10 June 2008
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Subject: Practical Course in 2D Membrane Crystallization and Observation
From: Patrick Sticher sticher {- at -} BIOC {- dot -} UNIZH {- dot -} CH
Date: 2008-06-10
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Subject: Re: Refinement in half occupancy
From: Matthew Chu linghonmatthew {- at -} GMAIL {- dot -} COM
Date: 2008-06-10

Thank you for all the advices, I am now able to refine the ligand in half
occupancy!

Matt



2008/6/10 Guillaume Marassio :

> I'am not sure it is your problem but you can try with A and B before the
> residue number.
> Hope it will be helpfull.
> Guillaume Marassio
>
> Matthew Chu a écrit :
>
> Dear All,
>>
>> Can anyone teach me how to refine a ligand in a protein structure with
>> half occupancy in refmac?
>> I have tried to combine the coordinates of the two different conformations
>> of that particular ligand in one pdb, after modeling in Coot individually,
>> and then changed the occupancy to 0.5 for each of the conformation. However,
>> I couldn't manage to refine this pdb in Refmac.
>> Thanks in advance!
>>
>> Best regards,
>> Matt
>>
>>
>>
>> ----------------------------------------------------------------------------
>> Matthew LH Chu
>> PhD Student
>> School of Pharmacy and Pharmaceutical Sciences
>> University of Manchester
>>
>> ----------------------------------------------------------------------------
>>
>
>
>


--
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Matthew LH Chu
PhD Student
School of Pharmacy and Pharmaceutical Sciences
University of Manchester
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