[ccp4bb] Surface complementarity

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CCP4bb <-- 2007 <-- April 2007 <-- 15 April 2007

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Subject: CNS, trouble with MASS definition in topology file
From: Jimson Wong jimsonwong {- at -} GMAIL {- dot -} COM
Date: 2007-04-15

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Subject: Re: Surface complementarity
From: Mike {- dot -} Lawrence {- at -} CSIRO {- dot -} AU Mike {- dot -} Lawrence {- at -} CSIRO {- dot -} AU
Date: 2007-04-15

Subject: Surface complementarity
From: Peter Miller peter_miller {- at -} MED {- dot -} UNC {- dot -} EDU
Date: 2007-04-15

Hi all:

I am attempting to use Sc to calculate the surface complementarity between two molecules in my
pdb. I can not figure out how to actually run the program!

I start with:

sc XYZIN xxx.pdb (I am not interested in surface figures, so I have no GRASP input files)

It asks:

Selection commands:

I define my two molecules having multiple chains with no problem, but then what do I do?? I have
tried RUN, SC, GO...nothing I have thought of actually runs the program and creates any output
files.

Any suggestions would be greatly appreciated. Thanks.

Peter Miller
University of North Carolina

CCP4bb navigation

CCP4bb <-- 2007 <-- April 2007 <-- 15 April 2007

Previous message:
Subject: CNS, trouble with MASS definition in topology file
From: Jimson Wong jimsonwong {- at -} GMAIL {- dot -} COM
Date: 2007-04-15

Next message:
Subject: Re: Surface complementarity
From: Mike {- dot -} Lawrence {- at -} CSIRO {- dot -} AU Mike {- dot -} Lawrence {- at -} CSIRO {- dot -} AU
Date: 2007-04-15