Re: [ccp4bb] Surface complementarity

Protein crystallography Programs for crystallography X-ray detectors
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CCP4bb <-- 2007 <-- April 2007 <-- 15 April 2007

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Subject: Surface complementarity
From: Peter Miller peter_miller {- at -} MED {- dot -} UNC {- dot -} EDU
Date: 2007-04-15

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From: David Briggs bassophile {- at -} GMAIL {- dot -} COM
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Subject: Re: Surface complementarity
From: Mike {- dot -} Lawrence {- at -} CSIRO {- dot -} AU Mike {- dot -} Lawrence {- at -} CSIRO {- dot -} AU
Date: 2007-04-15

Hi Peter

The last input command for SC is the standard CCP4

END

statement.

For some reason or other this seems to have slipped thru both the
writeup and the example file !!

Let me know if that doesn't fix it.

cheers

Dr Mike Lawrence
Head: X-ray Crystallography
CSIRO Molecular and Health Technologies
343 Royal Parade
Parkville
Victoria 3052
AUSTRALIA

Tel 61-3-9662-7100
Fax 61-3-9662-7347
email mike.lawrence@csiro.au

-----Original Message-----
From: CCP4 bulletin board [mailto:CCP4BB@JISCMAIL.AC.UK] On Behalf Of
Peter Miller
Sent: Monday, 16 April 2007 8:33 AM
To: CCP4BB@JISCMAIL.AC.UK
Subject: [ccp4bb] Surface complementarity

Hi all:

I am attempting to use Sc to calculate the surface complementarity
between two molecules in my
pdb. I can not figure out how to actually run the program!

I start with:

sc XYZIN xxx.pdb (I am not interested in surface figures, so I have no
GRASP input files)

It asks:

Selection commands:

I define my two molecules having multiple chains with no problem, but
then what do I do?? I have
tried RUN, SC, GO...nothing I have thought of actually runs the program
and creates any output
files.

Any suggestions would be greatly appreciated. Thanks.

Peter Miller
University of North Carolina

CCP4bb navigation

CCP4bb <-- 2007 <-- April 2007 <-- 15 April 2007

Previous message:
Subject: Surface complementarity
From: Peter Miller peter_miller {- at -} MED {- dot -} UNC {- dot -} EDU
Date: 2007-04-15

Next message:
Subject: Differentiating bound Mn & Ca.
From: David Briggs bassophile {- at -} GMAIL {- dot -} COM
Date: 2007-04-16