Re: [ccp4bb] sequential renumbering of a messed up pdb file

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CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

Previous message:
Subject: sequential renumbering of a messed up pdb file
From: William Scott wgscott {- at -} CHEMISTRY {- dot -} UCSC {- dot -} EDU
Date: 2008-08-01

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Subject: Re: sequential renumbering of a messed up pdb file
From: mjvdwoerd {- at -} NETSCAPE {- dot -} NET mjvdwoerd {- at -} NETSCAPE {- dot -} NET
Date: 2008-08-01

Subject: Re: sequential renumbering of a messed up pdb file
From: William Scott wgscott {- at -} CHEMISTRY {- dot -} UCSC {- dot -} EDU
Date: 2008-08-01

Admittedly I am a bit mentally challenged, but the output gave each
atom its own unique residue number!
On Jul 31, 2008, at 4:27 PM, Jacob Keller wrote:

> Doesn't moleman do just that?
>
> Jacob
>
> *******************************************
> Jacob Pearson Keller
> Northwestern University
> Medical Scientist Training Program
> Dallos Laboratory
> F. Searle 1-240
> 2240 Campus Drive
> Evanston IL 60208
> lab: 847.491.2438
> cel: 773.608.9185
> email: j-keller2@northwestern.edu
> *******************************************
>
> ----- Original Message ----- From: "William Scott"
> >
> To:
> Sent: Thursday, July 31, 2008 6:09 PM
> Subject: [ccp4bb] sequential renumbering of a messed up pdb file
>
>
>> Hi folks:
>> I am hoping there is a simple answer I have overlooked to the
>> following question. I have a pdb file in it that has multiple
>> residues that have the same number and chain ID, and I want to
>> force them to be renumbered sequentially. Is there a simple way
>> to do so (eg, pdbset) or am I doomed to fixing it manually?
>> Thanks.
>> Bill Scott
>> William G. Scott
>> Contact info:
>> http://chemistry.ucsc.edu/~wgscott/
>>

CCP4bb navigation

CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

Previous message:
Subject: sequential renumbering of a messed up pdb file
From: William Scott wgscott {- at -} CHEMISTRY {- dot -} UCSC {- dot -} EDU
Date: 2008-08-01

Next message:
Subject: Re: sequential renumbering of a messed up pdb file
From: mjvdwoerd {- at -} NETSCAPE {- dot -} NET mjvdwoerd {- at -} NETSCAPE {- dot -} NET
Date: 2008-08-01