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Re: [ccp4bb] sequential renumbering of a messed up pdb file
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CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999
Previous message:
Subject: Re: sequential renumbering of a messed up pdb file
From: William Scott wgscott {- at -} CHEMISTRY {- dot -} UCSC {- dot -} EDU
Date: 2008-08-01		Next message:
Subject: Re: sequential renumbering of a messed up pdb file
From: Abhinav Kumar abhinavk {- at -} SLAC {- dot -} STANFORD {- dot -} EDU
Date: 2008-08-01


Subject: Re: sequential renumbering of a messed up pdb file
From: mjvdwoerd {- at -} NETSCAPE {- dot -} NET mjvdwoerd {- at -} NETSCAPE {- dot -} NET
Date: 2008-08-01


Hi Bill,

I thought that Moleman2 in the Uppsala Software Factory suite could do this, but I haven't tried on residues with the same chain ID and number. Being optimistic today, nothing in the friendly manual says that you cannot do it, so that's what I would try.

Mark







-----Original Message-----
From: William Scott
To: CCP4BB@JISCMAIL.AC.UK
Sent: Thu, 31 Jul 2008 5:09 pm
Subject: [ccp4bb] sequential renumbering of a messed up pdb file









Hi folks:?
?

I am hoping there is a simple answer I have overlooked to the following question. I have a pdb file in it that has multiple residues that have the same number and chain ID, and I want to force them to be renumbered sequentially. Is there a simple way to do so (eg, pdbset) or am I doomed to fixing it manually??
?

Thanks.?
?

Bill Scott?
?


William G. Scott?
?

Contact info:?

http://chemistry.ucsc.edu/~wgscott/?
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