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Re: [ccp4bb] sequential renumbering of a messed up pdb file |
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CCP4bb navigationCCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999Subject: Re: sequential renumbering of a messed up pdb file From: William Scott wgscott {- at -} CHEMISTRY {- dot -} UCSC {- dot -} EDU Date: 2008-08-01 They are adjacent. On Jul 31, 2008, at 4:47 PM, Abhinav Kumar wrote: > I have a program that can fix it provided the residues with same > number are not adjacent in the pdb file. > Please let me know and I can send you the program. > > Thanks > Abhinav > > Abhinav Kumar > JCSG @ SSRL, MS 99 > 2575 Sand Hill Road > Menlo Park, CA 945025-7015 > > Phone: 650 926 2992 > Fax: 650 926 3292 > > > > On Jul 31, 2008, at 4:09 PM, William Scott wrote: > >> Hi folks: >> >> I am hoping there is a simple answer I have overlooked to the >> following question. I have a pdb file in it that has multiple >> residues that have the same number and chain ID, and I want to >> force them to be renumbered sequentially. Is there a simple way to >> do so (eg, pdbset) or am I doomed to fixing it manually? >> >> Thanks. >> >> Bill Scott >> >> >> William G. Scott >> >> Contact info: >> http://chemistry.ucsc.edu/~wgscott/ > CCP4bb navigationCCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999 |
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