[ccp4bb] to extract protein sequence from a rebuilt pdb file

- Protein crystallography

Main steps:

- Protein purification
- Crystallisation

Special:

- Programs for crystallography
- X-ray detectors

Basic tutorials:

   - Chemistry
   - Protein
   - Peptide
   - Amino Acids

Xtal community:

- CCP4BB

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CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

Previous message:
Subject: Anomalous correlation plot in scala
From: Daniele de Sanctis de {- dot -} sanctisd {- at -} GMAIL {- dot -} COM
Date: 2008-10-01

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Subject: Re: to extract protein sequence from a rebuilt pdb file
From: Phil Evans pre {- at -} MRC-LMB {- dot -} CAM {- dot -} AC {- dot -} UK
Date: 2008-10-01

Subject: to extract protein sequence from a rebuilt pdb file
From: Jane Bailey jbailey {- dot -} xtal {- at -} GOOGLEMAIL {- dot -} COM
Date: 2008-10-01

Hi, all

I am currently rebuilting my structure in coot, and the protein sequence is
around 98% rebuilt yet. I am looking for a way to extract protein sequence
from the rebuilt.pdb so that I could see clearly which part need to be
rebuilt by sequence alignment. Any ideas about this? thanks

Best
Jane

CCP4bb navigation

CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

Previous message:
Subject: Anomalous correlation plot in scala
From: Daniele de Sanctis de {- dot -} sanctisd {- at -} GMAIL {- dot -} COM
Date: 2008-10-01

Next message:
Subject: Re: to extract protein sequence from a rebuilt pdb file
From: Phil Evans pre {- at -} MRC-LMB {- dot -} CAM {- dot -} AC {- dot -} UK
Date: 2008-10-01