Re: [ccp4bb] Structures with pseudo-uridine?

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CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

Previous message:
Subject: Re: Superposition of maps from different crystal forms
From: Eleanor Dodson ccp4 {- at -} YSBL {- dot -} YORK {- dot -} AC {- dot -} UK
Date: 2007-04-27

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Subject: Re: Superposition of maps from different crystal forms
From: Paul Emsley emsley {- at -} YSBL {- dot -} YORK {- dot -} AC {- dot -} UK
Date: 2007-04-27

Subject: Re: Structures with pseudo-uridine?
From: Poul Nissen pn {- at -} MB {- dot -} AU {- dot -} DK
Date: 2007-04-27

Hi Yuan,

Basically all tRNA structures in pdb will contain pseudo-U, and
starting from old tRNAPhe literature you will find a lot on the
structural consequences of having pseudo-U in RNA.

Poul

On 27/04/2007, at 3.45, Yuan Lin wrote:

> Dear All,
> I solved a structure of a pseudouridylated RNA and am now
> starting to
> write it up. Except for the ribosome, I can only find one X-ray
> structure
> that contains pseudo-uridine (Arnez JG and Steitz TA, 1994,
> Biochemistry
> 33:7560-7567). I was wondering is there any X-ray structures that I am
> missing? Also, I am looking for the references on the effect of psi
> on RNA
> structure, and likewise have come up empty handed. Could anyone
> suggest some
> for me? Thanks very much!
>
>
> Best,
> Yuan
>
> ------------------------
> Yuan Lin
> Graduate Student
> Biochemistry and Molecular Biology
> Johns Hopkins University
> Rm. W8702 BSPH
> 615 N. Wolfe St.
> Baltimore, MD 21205
> Ph. 443-287-4988
>

CCP4bb navigation

CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

Previous message:
Subject: Re: Superposition of maps from different crystal forms
From: Eleanor Dodson ccp4 {- at -} YSBL {- dot -} YORK {- dot -} AC {- dot -} UK
Date: 2007-04-27

Next message:
Subject: Re: Superposition of maps from different crystal forms
From: Paul Emsley emsley {- at -} YSBL {- dot -} YORK {- dot -} AC {- dot -} UK
Date: 2007-04-27