Re: [ccp4bb] monomer library in refmac5

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CCP4bb <-- 2007 <-- March 2007 <-- 01 March 2007

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Subject: Re: R-free error in highest resolution bin
From: ccp4 {- at -} YSBL {- dot -} YORK {- dot -} AC {- dot -} UK
Date: 2007-03-01

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From: artis {- at -} CHEMISTRY {- dot -} MONTANA {- dot -} EDU
Date: 2007-03-01

Subject: Re: monomer library in refmac5
From: ccp4 {- at -} YSBL {- dot -} YORK {- dot -} AC {- dot -} UK
Date: 2007-03-01

Hmm - I think this is a bug..
Garib - what do you think?
Eleanor

Jianghai Zhu wrote:
> Dear all,
>
> I have some N-acetyl-glucosamine (NAG) in my structure. When I
> searched the monomer library in CCP4 6.0.1, I found out that NAG is
> actually N-acetyl-glucose, which is much less common, I believe. I
> downloaded the high-resolution structure of N-acetyl-glucosamine from
> HIC-UP and used sketcher to generate a cif library. I named the sugar
> NAG. I read this new cif file into refmac5 (5.3) and used "make check
> none" in the refinement. I thought my library would overwrite the NAG
> in the monomer library in CCP4, but refmac5 still use the NAG it
> found from the monomer library. Is there anyway to make sure refmac5
> will use my library even there is another one in the monomer library
> with the same name?
>
> Thanks.
>
> Jianghai
>
>

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CCP4bb <-- 2007 <-- March 2007 <-- 01 March 2007

Previous message:
Subject: Re: R-free error in highest resolution bin
From: ccp4 {- at -} YSBL {- dot -} YORK {- dot -} AC {- dot -} UK
Date: 2007-03-01

Next message:
Subject: Re: process SeMet labelled data
From: artis {- at -} CHEMISTRY {- dot -} MONTANA {- dot -} EDU
Date: 2007-03-01