Re: [ccp4bb] Protein folding pattern schematic

- Protein crystallography

Main steps:

- Protein purification
- Crystallisation

Special:

- Programs for crystallography
- X-ray detectors

Basic tutorials:

   - Chemistry
   - Protein
   - Peptide
   - Amino Acids

Xtal community:

- CCP4BB

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CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

Previous message:
Subject: Xtals: protein or something else?
From: Jan Schoepe j {- dot -} schoepe {- at -} YAHOO {- dot -} DE
Date: 2008-11-10

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Subject: Re: Xtals: protein or something else?
From: Jeff Christensen jchristensen {- at -} DECODE {- dot -} COM
Date: 2008-11-10

Subject: Re: Protein folding pattern schematic
From: Tommi Kajander tommi {- dot -} kajander {- at -} HELSINKI {- dot -} FI
Date: 2008-11-10

ALSCRIPT used to be popular, bit old now i guess and not so simple.
but does the job.

tommi

On Nov 10, 2008, at 8:39 PM, Partha Chakrabarti wrote:

> Hi Charu,
>
> Indonesia is one option, system independent but you need Java for
> that.
>
> http://xray.bmc.uu.se/dennis/
>
> Cheers, Partha
>
>
> On Mon, Nov 10, 2008 at 6:53 PM, Charu Chaudhry
> wrote:
>> Hello,
>> Does anyone know of a program that can automatically generate a
>> folding
>> pattern schematic diagram showing the arrangement of secondary
>> structure
>> elements for a protein ? Presumably one would have to feed it a PDB
>> file
>> with secondary structure assigned from DSSP.
>> Thanks!
>> Charu
>> Mayer lab/NIH
>>
>
>
>
> --
> MRC National Institute for Medical Research
> Division of Molecular Structure
> The Ridgeway, NW7 1AA, UK
> Email: pchakra@nimr.mrc.ac.uk
> Phone: + 44 208 816 2515
>

Tommi Kajander, Ph.D.
Structural Biology and Biophysics
Institute of Biotechnology
University of Helsinki
Viikinkaari 1
(P.O. Box 65)
00014 Helsinki
Finland
p. +358-9-19158903
tommi.kajander@helsinki.fi

CCP4bb navigation

CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

Previous message:
Subject: Xtals: protein or something else?
From: Jan Schoepe j {- dot -} schoepe {- at -} YAHOO {- dot -} DE
Date: 2008-11-10

Next message:
Subject: Re: Xtals: protein or something else?
From: Jeff Christensen jchristensen {- at -} DECODE {- dot -} COM
Date: 2008-11-10