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Re: [ccp4bb] refinment in lower space group vs. higher |
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- Protein crystallographyMain steps:- Protein purification- Crystallisation Special:- Programs for crystallography- X-ray detectors Basic tutorials:- Chemistry- Protein - Peptide - Amino Acids Xtal community:- CCP4BB |
CCP4bb navigationCCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999Subject: Re: refinment in lower space group vs. higher From: James Holton JMHolton {- at -} LBL {- dot -} GOV Date: 2009-01-03 You should pick your free-R set in C2221 and then symmetry-expand it to C2. Otherwise, every hkl in your "free" R set will have an NCS "mate" in the working set, and using NCS restrains will completely invalidate the free R analysis. That is, your free-R will be essentially equal to the regular crystallographic R and it will be possible to take a completely wrong MR solution and refine it to an "acceptable" free R, and if you do that, we will all make fun of you. -James Holton MAD Scientist Yu Jiang wrote: > > Dear all, > > I am now refining one structure in space group C2 with 2 molecules, > however we find the data can be processed in C2221 with 1 molecule. > The questions are: > > 1. Can I still use space group C2 instead of C2221, even if the two > molecules almost have crystallographic symmetry? Should I provide any > excuses? > > 2. Is there any indication or necessity to refine structures in lower > space group instead of higher? > > Many thanks! > > > CCP4bb navigationCCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999 |
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