Re: [ccp4bb] To identify specific type of interaction

- Protein crystallography

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CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

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Subject: To identify specific type of interaction
From: Kadhirvel Saraboji sarabojik {- at -} YAHOO {- dot -} COM
Date: 2009-02-04

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Subject: Re: To identify specific type of interaction
From: Andreas_Förster docandreas {- at -} GMAIL {- dot -} COM
Date: 2009-02-04

How about PISA? That's what it's designed for.
http://www.ebi.ac.uk/msd-srv/prot_int/pistart.html

Andreas

Kadhirvel Saraboji wrote:
> Dear all,
> Is there any program/server to identify all occurrences of specific type
> of interaction between molecules in crystal structures, whether they are
> within the same asymmetric unit or between symmetry-related molecules? I
> am interested in particular in interactions in which anti-parallel beta
> strands form a dimer interface, leading to an extended beta sheet shared
> between the two molecules, and would like to analyse how common they are.
>
> Thanks in advance!
> Saraboji
>
>

--
Andreas Förster, Research Associate
Paul Freemont & Xiaodong Zhang Labs
Department of Biochemistry, Imperial College London

CCP4bb navigation

CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

Previous message:
Subject: To identify specific type of interaction
From: Kadhirvel Saraboji sarabojik {- at -} YAHOO {- dot -} COM
Date: 2009-02-04

Next message:
Subject: Re: problem with ccp4 6.1.0 installation
From: Ronan Keegan ronan {- dot -} keegan {- at -} STFC {- dot -} AC {- dot -} UK
Date: 2009-02-04