Re: [ccp4bb] problem with ccp4 6.1.0 installation

- Protein crystallography

Main steps:

- Protein purification
- Crystallisation

Special:

- Programs for crystallography
- X-ray detectors

Basic tutorials:

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   - Amino Acids

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CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

Previous message:
Subject: Re: To identify specific type of interaction
From: Andreas_Förster docandreas {- at -} GMAIL {- dot -} COM
Date: 2009-02-04

Next message:
Subject: Re: PHENIX & BSS refinement
From: Miguel Ortiz Lombardia miguel {- dot -} ortiz-lombardia {- at -} AFMB {- dot -} UNIV-MRS {- dot -} FR
Date: 2009-02-04

Subject: Re: problem with ccp4 6.1.0 installation
From: Ronan Keegan ronan {- dot -} keegan {- at -} STFC {- dot -} AC {- dot -} UK
Date: 2009-02-04

Dear Witek,

On some systems we have found that there can be a problem with the CCP4
distributed version of Graphviz which is used to display the graphical
view of the project. This is caused by a missing font package. It looks
as if this has caused the error you see. To fix it we suggest that you
install the official Graphviz distribution available from:

http://www.graphviz.org/

This includes the missing fonts and should work for you. Make sure that
the new executables for Graphviz precede the CCP4 versions in your PATH.

Let me know if this works for you.

Kind regards,

Ronan Keegan
CCP4 Scientific Programmer

Witek Kwiatkowski wrote:
> Hello,
>
> After installation I tried Graphical View of Project and I got:
> ----
> dotgraph_render: error: "graph 1.000 5.861 0.528
> node Job1 0.472 0.264 0.945 0.500 "1: autoSHARP autoSHARP" filled box
> black #9DD05B
> node Job2 1.667 0.264 0.945 0.500 "2: autoSHARP autoSHARP" filled box
> black #9DD05B
> node Job3 3.194 0.264 1.611 0.511 "3: refmac5 Restrained refinement
> using isotropic B factors" filled box black #9DD05B
> node Job4 5.056 0.264 1.611 0.511 "4: refmac5 Restrained refinement
> using isotropic B factors" filled box black #9DD05B
> stop
> Error: Could not find/open font
> Error: Could not find/open font
> Error: Could not find/open font
> Error: Could not find/open font
> Error: Could not find/open font
> Error: Could not find/open font
> Error: Could not find/open font
> Error: Could not find/open font
> Error: Could not find/open font
> Error: Could not find/open font"
> -------
>
>
> Anyone had simmilar problem? What and where the font should be?
>
> Thanks,
> Witek

CCP4bb navigation

CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

Previous message:
Subject: Re: To identify specific type of interaction
From: Andreas_Förster docandreas {- at -} GMAIL {- dot -} COM
Date: 2009-02-04

Next message:
Subject: Re: PHENIX & BSS refinement
From: Miguel Ortiz Lombardia miguel {- dot -} ortiz-lombardia {- at -} AFMB {- dot -} UNIV-MRS {- dot -} FR
Date: 2009-02-04