[ccp4bb] AW: [ccp4bb] Broken chain in Pymol display

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CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

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Subject: Re: Broken chain in Pymol display
From: Herman {- dot -} Schreuder {- at -} SANOFI-AVENTIS {- dot -} COM Herman {- dot -} Schreuder {- at -} SANOFI-AVENTIS {- dot -} COM
Date: 2009-03-04

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Subject: Crystallographer Position Available at Merck Research Laboratories
From: "Soisson, Stephen M" stephen_soisson {- at -} MERCK {- dot -} COM
Date: 2009-03-04

Subject: AW: Broken chain in Pymol display
From: Clemens Steegborn Clemens {- dot -} Steegborn {- at -} RUB {- dot -} DE
Date: 2009-03-04

Hi Joe,

check chainID and segID; there might be a break in one of them not noticed
by phenix because it uses the other one, but then leading to an apparent
backbone break in coot because it uses the other one ...

Best
Clemens

-----Original Message-----
From: CCP4 bulletin board [mailto:CCP4BB@JISCMAIL.AC.UK] On Behalf Of
Joe Xtal
Sent: Monday, March 02, 2009 5:08 PM
To: CCP4BB@JISCMAIL.AC.UK
Subject: [ccp4bb] Broken chain in Pymol display

Hi all,

I tried to display a refined structure (final steps in phenix.refine) in
Pymol, but several places are not connected. BTW, the structure displays
normally in Coot and bond angle and length deviation are below 1.0 and
0.006, respectively.

Thank you,

Joe

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CCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999

Next message:
Subject: Crystallographer Position Available at Merck Research Laboratories
From: "Soisson, Stephen M" stephen_soisson {- at -} MERCK {- dot -} COM
Date: 2009-03-04