| Quick navigation: | Home | Site Map || References | Biography || Copyright | Other copyright | Contact us | Advert | | |
Re: [ccp4bb] .phs file conversion |
||
- Protein crystallographyMain steps:- Protein purification- Crystallisation Special:- Programs for crystallography- X-ray detectors Basic tutorials:- Chemistry- Protein - Peptide - Amino Acids Xtal community:- CCP4BB |
CCP4bb navigationCCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999Subject: Re: .phs file conversion From: Mo Wong mowong22 {- at -} GMAIL {- dot -} COM Date: 2009-03-04 Hi, Not the quickest way, but you can easily convert PHS files to MTZ files using CCP4i ("Convert to/modify/extend MTZ" - via the f2mtz programme). Then generate the map as you would a normal MTZ file. Since PHS files come in 2 flavours, check the following web site to see which format your's is in ( http://www.sdsc.edu/CCMS/Packages/XTALVIEW/XV5.docmod2_2.html#xfit). You need to input the Fortran format of the PHS file; for H, K, L, Fobs, FOM, and PHI it's "3f4.0,f8.2,2f10.2". Other useful tools for PHS/FIN/FSFOUR maps can be found at: http://www.scripps.edu/~cdputnam/software/software.html Cheers! On Wed, Mar 4, 2009 at 2:48 PM, John Bruning > Hi, > > I have a .phs file with map coefficients that I would like to open in > pymol. So, I would like to convert the file to either a ccp4 or cns map > file, or a file format that pymol will recognize. I do not have an .mtz > file with the same map coefficients included. Can anyone help me? > > > Thanks, > John > CCP4bb navigationCCP4bb <-- 1999 <-- November 1999 <-- 30 November 1999 |
|
| ProteinCrystallography.org: Copyright 2006-2010 by Quid United Ltd |